Publications

Screening tools for predicting mortality of adults with suspected sepsis: an international sepsis cohort validation study
Authors →
Blair PW, Mehta R, Oppong CK, Tin S, Ko E, Tsalik EL, Chenoweth J, Rozo M, Adams N, Beckett C, Woods CW, Striegel DA, Salvador MG, Brandsma J, McKean L, Mahle RE, Hulsey WR, Krishnan S, Prouty M, Letizia A, Fox A, Faix D, Lawler JV, Duplessis C, Gregory MG, Vantha T, Owusu-Ofori AK, Ansong D, Oduro G, Schully KL, Clark DV
2023

A machine learning approach identifies distinct early-symptom cluster phenotypes which correlate with hospitalization, failure to return to activities, and prolonged COVID-19 symptoms
Authors →
Epsi NJ, Powers JH, Lindholm DA, Mende K, Malloy A, Ganesan A, Huprikar N, Lalani T, Smith A, Mody RM, Jones MU, Bazan SE, Colombo RE, Colombo CJ, Ewers EC, Larson DT, Berjohn CM, Maldonado CJ, Blair PW, Chenoweth J, Saunders DL, Livezey J, Maves RC, Sanchez Edwards M, Rozman JS, Simons MP, Tribble DR, Agan BK, Burgess TH, Pollett SD; EPICC COVID-19 Cohort Study Group.
2023

Rapid, Low-Complexity, Simultaneous Bacterial Group Identification and Antimicrobial Susceptibility Testing Performed Directly on Positive Blood Culture Bottles Using Chromogenic Agar
Authors →
Robberts FJL, Owusu-Ofori A, Oduro G, Gyampomah TK, Marles N, Fox AT, Chenoweth JG, Schully KL, Clark DV
2022

Point-of-Care Lung Ultrasound Predicts Severe Disease and Death Due to COVID-19: A Prospective Cohort Study
Authors →
Blair, Paul W. MD; Siddharthan, Trishul MD; Liu, Gigi MD; Bai, Jiawei PhD; Cui, Erja BS; East, Joshua RPSGT; Herrera, Phabiola MD; Anova, Lalaine MS; Mahadevan, Varun BA; Hwang, Jimin MD; Hossen, Shakir MBBS; Seo, Stefanie BS; Sonuga, Olamide BS; Lawrence, Joshua BS; Peters, Jillian MD; Cox, Andrea L. MD, PhD; Manabe, Yukari C. MD; Fenstermacher, Katherine PhD; Shea, Sophia MPH; Rothman, Richard E. MD, PhD; Hansoti, Bhakti MD; Sauer, Lauren MS; Crainiceanu, Ciprian PhD; Clark, Danielle V. PhD
2022

Genomic and virologic characterization of samples from a shipboard outbreak of COVID-19 reveals distinct variants within limited temporospatial parameters
Authors →
Regina Z. Cer, Logan J. Voegtly, Bishwo N. Adhikari, Brian L. Pike, Matthew R. Lueder, Lindsay A. Glang, Francisco Malagon, Ernesto Santa Ana, James M. Regeimbal, Maria F. Potts-Szoke, Kevin L. Schully, Darci R. Smith and Kimberly A. Bishop-Lilly
2022

Assessing the use of a micro-sampling device for measuring blood protein levels in healthy subjects and COVID-19 patients
Authors →
Joost Brandsma, Josh G. Chenoweth, Melissa K. Gregory,
Subramaniam Krishnan, Paul W. Blair, Deborah A. Striegel,
Rittal Mehta, Kevin L. Schully, J. Stephen Dumler, CDR
Cynthia S. Sikorski, Kelsey O’Connor, Susan A.
Reichert-Scrivner, Carmen M. Paguirigan, Catherine F. T.
Uyehara, COL Viseth Ngauy, Christopher A. Myers, Danielle
V. Clark
2022
On the Environmental Presence of Burkholderia pseudomallei in South-Central Ghana
Authors →
George Oduro, F. J. Lourens Robberts, Paul K. A. Dartey,
Alex Owusu-Ofori, Chris Oppong, Thomas K. Gyampomah, Isaac
Boakye, Emmanuel Quainoo, David P. AuCoin, Danielle V.
Clark, Kevin L. Schully
2022

Multiplexed host immune response biosensor for rapid sepsis stratification and endotyping at point-of-care
Authors →
Ambalika S. Tanak, Abha Sardesai, Sriram Muthukumar,
Subramaniam Krishnan, Deborah A. Striegel, Kevin
L.Schully, Danielle V. Clark, Shalini Prasad
2022

Durability of SARS-CoV-2–Specific T-Cell Responses at 12 Months Postinfection
Authors →
Zhongyan Lu, Eric D Laing, Jarina Pena DaMata, Katherine
Pohida, Marana S Tso, Emily C Samuels, Nusrat J Epsi,
Batsukh Dorjbal, Camille Lake, Stephanie A Richard, Ryan C
Maves, David A Lindholm, Julia S Rozman, Caroline English,
Nikhil Huprikar, Katrin Mende, Rhonda E Colombo,
Christopher J Colombo, Christopher C Broder, Anuradha
Ganesan, Charlotte A Lanteri, Brian K Agan, David Tribble,
Mark P Simons, Clifton L Dalgard, Paul W Blair, Josh
Chenoweth, Simon D Pollett, Andrew L Snow, Timothy H
Burgess, Allison M W Malloy, EPICC COVID-19 Cohort Study
Group
2021

COVID-19 Outcomes Among US Military Health System Beneficiaries Include Complications Across Multiple Organ Systems and Substantial Functional Impairment
Authors →
Stephanie A Richard, Simon D Pollett, Charlotte A Lanteri,
Eugene V Millar, Anthony C Fries, Ryan C Maves, Gregory C
Utz, Tahaniyat Lalani, Alfred Smith, Rupal M Mody,
Anuradha Ganesan, Rhonda E Colombo, Christopher J Colombo,
David A Lindholm, Cristian Madar, Sharon Chi, Nikhil
Huprikar, Derek T Larson, Samantha E Bazan, Caroline
English, Edward Parmelee, Katrin Mende, Eric D Laing,
Christopher C Broder, Paul W Blair, Josh G Chenoweth, Mark
P Simons, David R Tribble, Brian K Agan, Timothy H
Burgess, and EPICC COVID-19 Cohort Study Group
2021

An approach to rapidly assess sepsis through multi-biomarker host response using machine learning algorithm
Authors →
Abha Umesh Sardesai, Ambalika Sanjeev Tanak, Subramaniam
Krishnan, Deborah A. Striegel, Kevin L. Schully, Danielle
V. Clark, Sriram Muthukumar & Shalini Prasad
2021

Multiplexed cytokine detection using electrochemical point-of-care sensing device towards rapid sepsis endotyping
Authors →
Ambalika S. Tanak, Sriram Muthukumar, Subramaniam
Krishnan, Kevin L. Schully, Danielle V. Clark, and Shalini
Prasada
2021

An Observational Study of Sepsis in Takeo Province Cambodia: An in-depth examination of pathogens causing severe infections
Authors →
Michelle Rozo, Kevin L. Schully, Casandra Philipson,
Amitha Fitkariwala, Dararith Nhim, Tin Som, Darith Sieng,
Bora Huot, Sokha Dul, Michael J. Gregory, Vireak Heang,
Andrew Vaughn, Te Vantha, Angela M. Prouty, Chien-Chung
Chao, Zhiwen Zhang, Tatyana Belinskaya, Logan J. Voegtly,
Regina Z. Cer, Kimberly A. Bishop-Lilly, Chris Duplessis,
James V. Lawler, Danielle V. Clark
2020
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Austere environments Consortium for Enhanced Sepsis Outcomes (ACESO)
Authors →
Subramaniam Krishnan, Charmagne Beckett, Benjamin
Espinosa, Danielle V Clark
2020
Indirect Detection of Burkholderia pseudomallei Infection in a US Marine After Training in Australia
Authors
Derek T Larson, Kevin L Schully, Ammarah Spall, James V
Lawler, Ryan C Maves
2020

Aspiring to precision medicine for infectious diseases in resource limited settings
Authors →
Kevin L. Schully, Danielle V. Clark
2019

Direct-from-blood RNA sequencing identifies the cause of post-bronchoscopy fever
Authors →
Emily R. Ko, Casandra W. Philipson, Thomas W. Burke,
Regina Z. Cer, Kimberly A. Bishop-Lilly, Logan J. Voegtly,
Ephraim L. Tsalik, Christopher W. Woods, Danielle V. Clark
& Kevin L. Schully
2019

Next-generation Diagnostics for Melioidosis: Evaluation of a Prototype i-STAT Cartridge to Detect Burkholderia pseudomallei Biomarkers
Authors →
Kevin L Schully, Charles C Young, Mark Mayo, Amy L
Connolly, Vanessa Rigas, Ammarah Spall, Alyssa A Chan,
Mark G Salvador, James V Lawler, Jason A Opdyke, Danielle
V Clark, Bart J Currie
2019

Evaluating the discriminating capacity of cell death (apoptotic) biomarkers in sepsis
Authors →
Christopher Duplessis, Michael Gregory, Kenneth Frey,
Matthew Bell, Luu Truong, Kevin Schully, James Lawler,
Raymond J. Langley, Stephen F. Kingsmore, Christopher W.
Woods, Emanuel P. Rivers, Anja K. Jaehne, Eugenia B.
Quackenbush, Vance G. Fowler, Ephraim L. Tsalik & Danielle
Clark
2018

Retrospective Analysis of Fever and Sepsis Patients from Cambodia Reveals Serological Evidence of Melioidosis
Authors →
Vichaya Suttisunhakul, Phireak Hip, Pidor Ouch, Piseth Ly,
Chonthida Supaprom, Agus Rachmat, Michael Prouty, Andrew
Vaughn, Ahreej Eltayeb,4, Sim Kheng, Danielle V. Clark,
James V. Lawler, Narisara Chantratita, Mary N. Burtnick,
Paul J. Brett, and Kevin L. Schully
2018

Melioidosis in lower provincial Cambodia: A case series from a prospective study of sepsis in Takeo Province
Authors →
Kevin L. Schully, Catherine M. Berjohn, Angela M. Prouty,
Amitha Fitkariwala, Tin Som, Darith Sieng, Michael J.
Gregory, Andrew Vaughn, Sim Kheng, Vantha Te, Christopher
A. Duplessis, James V. Lawler, Danielle V. Clark
2017

Long-term sequelae after Ebola virus disease in Bundibugyo, Uganda: a retrospective cohort study
Authors →
Dr Danielle V Clark, Hannah Kibuuka, Monica Millard, Salim
Wakabi, Luswa Lukwago, Alison Taylor, Michael A Eller,
Leigh Anne Eller, Nelson L Michael, Anna N Honko, Gene G
Olinger Jr, Randal J Schoepp, Matthew J Hepburn, Lisa E
Hensley, Merlin L Robb
2015